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Single CellSequencing is a next-generation sequencing (NGS) technique primarily used to
analyze the variations in protein and genetic information between cells to
extract genetic data on microorganisms, which are otherwise challenging to
cultivate at the individual cell level and to comprehend their particular roles
in the micro-environment better. Research studies in the field of single cell
sequencing focus on a wide array of applications right from immunotherapy, neurobiology,
and cancer treatment to, in the latest feat, COVID-19.
The leading companies in the industry include Thermo Fisher Scientific Inc., 10x Genomics Inc., Becton, Dickinson & Company, Illumina, Bio-Rad, Fludigim, BGI, F Hoffman-La Roche Ltd., Qiagen, and Oxford Nanopore Technologies. 10x Genomics recently announced the acquisition of the Boston-based ReadCoor, Inc.. The company’s second in situ sequencing takeover was valued at USD 350 million in cash and stock consideration. It had previously announced the acquisition of Cartana, the Stockholm-based developer of in situ RNA analysis technology, in August.
In situ methods allow
researchers to measure a colossal number of molecules directly through the
precise location of the molecule at sub-cellular resolution. The newly-acquired
capabilities might complement 10x Genomics Chromium Single Cell and Visium
Spatial platforms and help the company establish the foundation for its third
tech platform, widening its consumer base and facilitating the new translational
as well as clinical applications.
The most relevant development recently pertains to the ongoing COVID-19 pandemic. The changes in the SARS-CoV-2 virus genome in the transmission of the infection have remained unclear. A team of University of Chicago researchers has used a new approach, a technique named FD-seq, which is a high-throughput single cellsequencing approach to sequence single cells applicable for paraformaldehyde (PFA) treatment.
The team examined the immune response of human lung cells infected by coronavirus OC43, a virus belonging to the same family as SARS-CoV-2, which causes the common cold, which has been used successfully in drug discovery to prevent the replication of SARS-CoV-2 in vitro. Mining this ‘biological bitcoin’ could have inestimable benefits, and the worth of genetic information will continue to be a major driver for the growth of the single cell sequencing market. However, the costs of it might also be similarly prohibitive for most consumers, impeding its accessibility and, subsequently, its growth.
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